FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007757

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007757
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences440824
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTCTAG100.0071642403144.492371
CTAGCAC100.0071642403144.492371
AGTCTAG200.00627168328.81245645-49
CCTACGC2359.407906E-418.4458331
ATCAAGA5300.001489492110.8556066
CTTGCCC4700.00755897510.7112497
TCGAAGA6600.0090698768.7243072
CTCCAGC9150.00172885477.8957581
Produced by FastQC (version 0.11.5)