FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007759

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007759
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences910828
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTTCGT6400.0067016159.0542611
CCCGCAT7250.00183707168.9918191
GTTCAGA9800.0033129727.3912341
CTTGAAT10900.0093025426.64532951
GTATATT12300.004122026.4778461
CTGAAAT13950.00221897876.230891
Produced by FastQC (version 0.11.5)