FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007762

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007762
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences507921
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGCATT3656.0194267E-515.869021
ATTCCAC5250.001301821711.0327471
GGTAAAA8951.3894797E-48.898621
CTTTTGT9251.9870418E-48.6100151
ATTATAA12900.00714142256.14345936
Produced by FastQC (version 0.11.5)