FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007775

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007775
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences746058
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAG5450.002255153110.3297566
TTTACAC5550.00262261710.1436347
GGCTGTT7450.00275039238.60038951
CTTTTAA8650.00128972988.1354285
CCAAAAT9400.0026083747.57362941
CAACAAC11550.00255346726.78020141
Produced by FastQC (version 0.11.5)