FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007778

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007778
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2075903
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAACT8659.834764E-48.3628931
CTTTCGA13854.7267713E-78.3568541
CTCAACC10901.3454087E-47.96392871
CGCCAAT12150.00368131936.5492121
CTTTAAT36600.06.52237031
CTCATTT22754.5178422E-76.35947471
CTTAAAT25055.892616E-86.35312751
CTAAAAT26853.5211997E-86.1966391
CCTCTGT16904.7650732E-45.9925821
CTCAAAG17055.3367496E-45.93986131
CTCCGAA17256.1959063E-45.87099271
CTCTTCT26851.4334164E-65.65780071
CACTTAT18200.00122583235.56454041
CTTCGAT19755.774565E-45.49410341
CTACAAT21252.623736E-45.4467031
CACCAAC15950.0099887055.44243431
CAACGAT17350.00422120055.42021561
CTCATAT21503.0991467E-45.3833691
CCAAAGG17700.00533934785.31303551
CTTCATT38201.0308213E-85.30233671
Produced by FastQC (version 0.11.5)