FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007783

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007783
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1762531
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTTAAT18406.266873E-77.0650071
CCTCAAT12550.0052509266.3300461
CCCCGCT13000.00757057456.11092851
AAAGTGC15450.00108739776.07401045
TCAATCC18201.9599593E-45.9498383
CTTTGAT26601.2421315E-65.70158431
TTCCAAT25351.1225556E-45.1260152
Produced by FastQC (version 0.11.5)