FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007785

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007785
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1233203
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCGAA9100.00162443367.94838141
CTTTAAT14701.1654047E-67.87268261
CTTGAAT12608.7922665E-57.46264651
TTTAATC11703.1571882E-47.39682252
CTTTAAA13552.154231E-46.9394351
CTTCTAT15001.0167225E-46.7508251
CTTTGGT12959.743801E-46.7024191
CTTTGGA15359.81226E-46.12569051
CAATTAT14550.00361552025.9653831
CTTCTGA14600.00375649335.94495341
CTTGAAA22551.6937796E-55.77359151
AATTGAA19204.120824E-45.6326995
TCAATCT15800.0093021155.4773943
Produced by FastQC (version 0.11.5)