FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007787

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007787
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1330387
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTAAGG2950.00431353714.6899831
CTCAAAT10004.915846E-69.3893471
CTCCAGT8950.0013987498.0699161
GTCAGCT13201.5901441E-47.11314151
CCCAGAT13000.00103496776.66699171
CCATCAC13350.00139821256.4922021
ATGACAT15450.00110951736.06354053
CCCGAAA16000.00164242165.8683421
TCAAATT16350.00217548485.7317072
TTCTTAA15250.0063575215.669886
CGAAGAT15800.0091535585.48551
CCTTGAA17900.00619932735.24544531
CAAAATT20850.00121688735.1960971
CTGCCAT22305.310821E-45.18211651
Produced by FastQC (version 0.11.5)