FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007788

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007788
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3024451
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAGGA18405.5185246E-66.605711
CCCCGAA22552.0457599E-55.7070851
CATCGAT27604.9201117E-75.6990441
CTCTTGT18150.00137371935.51492741
CTTCGAA15650.009224715.4822061
GGTAGGC17050.00394699685.4513911
CACAGGT17550.0055461155.2960811
Produced by FastQC (version 0.11.5)