FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007793

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007793
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3495420
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCGAT33459.094947E-126.48968271
CCCAGAC18251.9733401E-45.9473941
CCCCGAT18000.00106242835.62799741
CTTCAAT52451.8189894E-125.2424761
CTTAATT29256.8565114E-65.1950741
CTCAAAT27457.0225266E-55.0085221
Produced by FastQC (version 0.11.5)