FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007798

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007798
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences782145
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACCTCA6204.8695735E-410.3940615
CTTTGAT12004.3908771E-47.18654161
CAAAAGC13250.00135692126.5085661
CATCAAC13250.0096830765.96618561
ATCAAAA15600.008394595.5281091
Produced by FastQC (version 0.11.5)