FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007799

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007799
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences708918
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGGAT5050.001030040211.3472621
CGATCAT6659.2387496E-49.6942321
GTCGAAC7150.001791149.0163131
CCCGGCT8559.6437923E-48.3777311
CAAAAAG13905.0955878E-67.7298131
CTTTGAA11753.5794897E-47.3153631
CTTGAAA13953.457023E-46.675161
TTGAAAA19204.6462798E-45.58184772
Produced by FastQC (version 0.11.5)