FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007800

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007800
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences566372
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCAAGAG3100.00596605813.9873152
GTCCAAA4900.00908074710.4504011
CTCAAAA7853.3333668E-49.318831
CTTCTGT7950.00386734148.281451
CTTTATT13452.0713138E-57.6144191
TTGATTT16553.6698743E-46.1132882
CTTTTTT21200.00127627285.1759061
Produced by FastQC (version 0.11.5)