FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007805

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007805
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences842982
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACGCC5950.00380196989.6990278
ACATTTC8801.20279474E-49.0192044
CCCGGAT10306.295457E-47.7369421
TCAGCGT9400.00228224287.67774062
CTTCCAT14350.00303975216.05819461
CAAAAAA22405.4083456E-45.1747081
Produced by FastQC (version 0.11.5)