FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007808

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007808
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1114141
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTAAA4955.418253E-513.1619731
CTGTAGC4500.00540726711.2072296
CTATTGT6600.0086698438.7746491
AATTGGT7450.0024705938.7036015
CCCAAAG9653.153892E-48.2518061
CTGCGAA8850.00122343338.1797571
CTACAAT10300.00541303457.0282381
CTCATAA10450.00622798466.9273541
CCACCAT14150.00262217016.1391531
CTTCCAT21603.270617E-45.3622851
CTTTCAA18050.00665225975.2137451
CCCGGAA18250.00756674635.15660861
Produced by FastQC (version 0.11.5)