FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007813

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007813
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1153756
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTATAC6350.00636973239.1107961
TTAACGA6500.0080147828.8592724
TTAATTG8256.412591E-48.7299593
GTTAAAG8450.0074298617.70239641
CACCTAC8450.007751397.66601329
CACAGAA11600.00226847186.85764171
ATCAAAT15800.0090245825.4924261
CAAAGAT18500.00151112765.4726341
CGTTTTT22054.748349E-45.2231534
Produced by FastQC (version 0.11.5)