FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007819

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007819
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1294601
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CATGAAT10750.0082700816.7273571
CTCGCCG32056.031769E-95.8667591
CATTGAT15650.0081246345.54523371
GTCTTTT19350.00265839985.23238851
TAATATT20650.00112254855.2276374
Produced by FastQC (version 0.11.5)