FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007823

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007823
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences621780
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGAACC4500.00858858613.237108145
AGCAAGT4200.003166738212.0382271
GAAAGTA7803.5524846E-49.2601751
CTTTAAT9703.4093962E-48.1909591
CTTTCTG10100.00456503737.15142151
TGACTTG2600.0078281616.09155965-69
AAATATT26504.234729E-55.1620454
Produced by FastQC (version 0.11.5)