FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007837

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007837
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1522763
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAACT4350.005154038311.28002551
GTTCTAT14058.084624E-67.48369841
CTTTCAC15653.668835E-56.7185911
AGATACG12500.00106362646.65112166
CTCAAAA17057.974093E-45.75579071
Produced by FastQC (version 0.11.5)