FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007838

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007838
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences656567
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGTACC2500.00583153319.10844145
GTAAGAT3355.633208E-415.1357771
GACGTAC3650.00776716745.14587985-89
TTCCGGC18300.0079935945.1315849
Produced by FastQC (version 0.11.5)