FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007840

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007840
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1135622
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTACAC4650.00728952910.76610857
CTCAATT7803.7477174E-49.2123391
CCCTTCT10851.4726978E-58.6095041
TAGATTC7650.00335677788.413859
TTGCGTA8300.0069910997.75493438
CCGATTT14254.5666518E-46.52528573
CTTTTAT26703.5866833E-86.18986371
CAACAAA19901.1251504E-45.77738671
CCCGGAA16400.00234282415.69592241
CTTTGAA22058.205144E-55.5399371
Produced by FastQC (version 0.11.5)