FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007845

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007845
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1288708
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGGACC4850.00975139810.3520063
CCCGCAT12551.1027951E-68.6060571
CTTCAAT18156.556729E-87.537611
ATCACGA10150.00494608667.09399131
CAAGCTT12500.0054109026.3115214
CCCGGAA17550.00509742235.33363061
TTCAATA20800.00126975815.1794832
Produced by FastQC (version 0.11.5)