FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007856

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007856
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1588608
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAT12350.00419055536.4683381
CGTAAAT12750.00584182386.265411
TAAAGGC14600.00379904695.9392212
CATCTTG18800.00187678745.37974745
GGCATAT18100.00662520855.21592951
ATGGGTC5354.7087546E-55.131909465-69
GAACAAT19900.00358284785.10907131
Produced by FastQC (version 0.11.5)