FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007858

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007858
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1140176
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGTCTG5100.001075875811.2894854
AATCTAA6350.00662597979.0671455
ATTCACT8600.0092376647.5169296
AATTCAC10650.0079157426.75779065
CAGAAAC15650.00130192055.98311041
CAAAAGG15350.0068599855.630811
CTTCAAA20308.831238E-45.32222461
CAAATAT22807.623357E-45.0505593
Produced by FastQC (version 0.11.5)