FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007861

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007861
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1435084
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAGAG6650.0093264048.6970341
GTTCGAT9750.0032143067.4147791
CTTCGAT13602.2685152E-46.91046521
CTTAAAT15051.0693568E-46.7250321
GTTGATT14856.6213834E-46.32877641
GTCAGCA17851.4731199E-46.07513431
ATGCAAT17000.0035305995.5025616
ATTTCCG28003.4122295E-65.39674236
GTTTCAT21050.00136468125.15159851
CAGGAAT22706.734116E-45.0956191
ATCAGTT19950.00390982265.07327031
Produced by FastQC (version 0.11.5)