FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007869

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007869
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1314808
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACTTAA7400.00228272598.7800465
CTTCGAA9101.6832737E-48.7454011
CTTTTAT22102.664383E-76.5473591
CTTCGAT13300.00131465896.52766751
AACGATT12300.00426073936.4578692
CTAAAAA16503.4925592E-46.13864471
CTTTTAA16500.00232304735.700171
GTCAAGG16550.00240815555.68294951
CAACAAT16850.00298053075.58176951
CCTTGAT20952.1351074E-45.52540831
CTTTGAT18500.00150346345.47500751
CTGCTGT20258.05476E-45.35913471
AATTTTG19600.0031910925.1565355
Produced by FastQC (version 0.11.5)