FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007880

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007880
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences617480
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCGAG3150.00712592813.6173271
AGAGGCA4100.002966811912.14354
GCTATGG4400.00503202611.3146175
TCAACTT5450.002062918610.4405453
CCTGTAC5550.00229955810.3050041
CTGAATA8801.3254878E-59.6990294
CTTGTTT8700.00116733458.2173521
CTTCCAT11352.4548188E-47.5585161
CTTCAAC8600.0096214137.4816121
CTTTTAC9800.003956687.2571895
CTGGAAA12950.00110971296.6246451
CAAAGAA15200.00100067066.1143591
Produced by FastQC (version 0.11.5)