FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007883

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007883
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences999625
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTTGAG6558.115573E-49.8330691
CTCCGAT8851.3209405E-59.7034431
CCAAAAT11000.00144543587.1562891
CTTAAAA11200.00174907977.02849771
CAGAACG12356.83562E-46.91417033
AGATTTC13753.1459227E-46.72769744
TTGATTT21456.2595456E-55.63958843
CAAAAAA21857.600099E-55.5678221
AATATTC17000.00402861375.44097575
AAATATT21804.752165E-45.22263054
Produced by FastQC (version 0.11.5)