FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007898

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007898
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1296839
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAAGGT12507.408843E-46.8658931
GTAAACA11650.0027437226.73493342
CTCGAAG13550.0018472216.33384941
ATCAAAT18001.9132398E-45.9599761
CTTTCAA17800.00106737955.62514641
CTTTATT19355.1043136E-45.5441641
CTTTCTT25955.7462257E-65.51211641
GTTTCAT17200.0043540915.405561
CTCGCCG30052.4876372E-65.23605251
Produced by FastQC (version 0.11.5)