FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007906

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007906
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences635810
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAAAT3700.00123807113.6401991
GTGAAAG6456.5730925E-410.0602121
GAGGATT6400.0072189358.971862
CCCCCCC2752.5658135E-46.8420773105-109
Produced by FastQC (version 0.11.5)