FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007919

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007919
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1083980
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAAAT8004.4456817E-49.0563271
CTTTAAC7250.00183385698.993871
ATTGAGC7450.00242021218.7233526
GTCCATT9200.00177928647.8750671
CTTTGTT18506.4885353E-77.0492491
TCATAAC10750.0083889646.7172066
CTTTAAT16304.077336E-56.6672341
CTTCTAT15107.8871124E-46.23746971
ACAATTT15000.00515889755.77759743
TCATTCT15250.0061955785.68288233
CTTGAAA19304.136907E-45.6308771
ATTTAAT16800.00282808495.60629751
ATCAAAT20150.004305315.03378961
Produced by FastQC (version 0.11.5)