FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007921

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007921
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1474678
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTCGAG8700.00118824278.2043271
CCCCGCT10500.00747919046.797871
TCGAGAT11600.00273597126.73689563
GGATTCA12650.006769326.17707826
CTTCAAT21154.830826E-55.737211
AAATAGA17700.00108341085.6186986
CCTCCAC18350.00160930685.4457061
CAAACAG19000.00249314595.2594051
CCCAGCG17900.0071198195.1838511
Produced by FastQC (version 0.11.5)