FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007930

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007930
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2031773
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCCGA7552.3185842E-49.66468051
CTCGCCT7550.00248629958.6982131
CCCTTAT13402.3338216E-68.16809751
CCCTCAT8750.009372177.50531441
CCCGATC8750.009372177.50531441
CCCTTGT13551.9361547E-47.00065231
CCCCAGC13602.0257302E-46.97491461
CTCACGG13702.2162533E-46.92400261
AACTACC13450.00154969056.4337666
CTCATTT21701.1683205E-66.38893271
CTCCCCG14855.9212744E-46.38780071
GTTCAAT20753.8267517E-66.32978341
CCCGTCT14150.00240141186.1881281
CCCCGTT13100.0073671976.12711241
CCCAAAA25203.749592E-76.08069471
CCCCATT14800.003967355.9163521
CTTTGAT33902.903107E-95.81163741
CTCCCAA20151.08149565E-45.7940121
CTTTGGA30305.6341378E-85.77967071
CTCAAAT16800.00260244735.6463591
Produced by FastQC (version 0.11.5)