FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007936

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007936
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3139396
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTTACT15800.0099722095.44347141
CTTTGAT44851.546141E-105.2735531
CTTTGAA45201.9099389E-105.2327181
CTTCGGA32652.1545748E-65.04889631
CTTTGGT25651.5134022E-45.029641
CTCGAAA30001.2884668E-55.01706651
CCAAGAT24353.7768157E-45.0038211
Produced by FastQC (version 0.11.5)