FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007937

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007937
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences846487
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGAAT6203.8024908E-511.5497531
CCCAATT6455.689958E-511.1020891
CAAAGGG5900.00376781829.7096231
CTTTGAT13403.042529E-68.0158741
CCCAAAG9100.00179169637.86906341
CTAAAAT8450.0081092277.6269381
CCGTAAT8650.0099921787.45059251
GCAATAC10250.0059420476.9606055
ATTCAAT14250.0032013876.03018671
Produced by FastQC (version 0.11.5)