FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007940

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007940
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences963925
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTACGC4050.003041377512.104451
GAACGAC7450.0032840138.4340155
ATTTACA12852.404522E-68.1495996
GTTCCAT11002.172937E-47.63995171
CTCGAAA10200.0067867176.865971
GATATTA11700.00359174286.56379465
Produced by FastQC (version 0.11.5)