FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007942

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007942
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences845284
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC2450.001247829817.6883628
GTTCGAT8104.929914E-48.9625671
GATTCAG7700.00325458828.4421735
GGATATC11151.77787E-47.77336074
TCAAAAC11200.00157359717.09880922
CTTGAAT10450.00605522336.9470621
CTTCAAT14700.00388654795.9262691
TTCAATT14650.00392939945.9204472
ATTAAAT15450.00675050085.6385861
Produced by FastQC (version 0.11.5)