FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007945

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007945
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1303777
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGTAAC7300.00225233128.7930126
ACCTCTC6500.0086446288.7779816
AATCCAA13302.9014063E-68.0437325
CTCCGAT10650.0083547586.72026971
AGATTTA12759.579027E-46.71257354
CTGGATT12600.00600878246.2482511
CTGAAAT19106.588959E-55.99546531
CCTTCAT18152.1218878E-45.91494851
CCCGTTT14650.0043893635.862461
TCGAAGA15050.00607150235.6935012
CTTTGAT19154.3940748E-45.60607341
CTTTTAC16800.00327014255.53822231
CTTCAAA21754.243437E-45.26498371
AATGATT19150.00273670685.22028062
CTTTCTT32602.140947E-65.04947851
Produced by FastQC (version 0.11.5)