FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007952

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007952
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1634907
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTTAA8508.4429205E-48.4922651
CTCAAAG16557.0959377E-66.97853761
AACTCTG10500.00708850156.83579446
CAAGAAC20253.0626761E-66.4163781
AGCTTCG13200.0094481645.98132045
CTCAAAA21706.018117E-55.65498731
CCCTGTT15700.00859347455.51726681
GGTAAAT18350.0083456155.113871
CCGATTT21300.00175437625.05510043
Produced by FastQC (version 0.11.5)