FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007953

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007953
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1208366
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCAGTAG5600.0022680310.3236358
CAACGGG6900.001165759.4521321
CCCAAAT10155.368949E-47.85349561
TTCGATA12400.0045893496.4119712
AATCGAA12600.00543377836.3088885
CCCGAAA15057.5599435E-46.25955151
CGAAAAT15000.00496883225.7973081
CATGAAA21705.665557E-55.6770871
CACAAAA17150.00360182045.4930761
TTCCATA22951.3726558E-45.35410362
CTTCCAT21703.4422442E-45.34314061
Produced by FastQC (version 0.11.5)