FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007959

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007959
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1230774
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTAAAT4051.5131262E-414.2455161
AGCCAAG7950.00463034638.1191846
TCCACTT12356.2530936E-46.9686937
GTCTGCT14800.0045161265.84739881
CTTGCAA15400.00701411535.6195781
CAAATCC17150.0040687015.43668133
GGAAGAT22656.7528273E-45.09442231
Produced by FastQC (version 0.11.5)