FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007960

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007960
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1467088
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTTAAG10659.1544806E-47.47122341
CTTTGAA21259.452524E-76.46760231
CAAACGG15751.9189189E-46.429781
CTTAAAA16704.0892183E-46.0640141
CTTCCAC18550.001559635.4592471
CCTTGAA18150.0071653235.1810211
Produced by FastQC (version 0.11.5)