FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007961

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007961
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2227045
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGAAT4050.002355852412.5250561
CTTCGAT17251.6240338E-67.14161541
GTCATGA16607.009199E-66.9847121
CCCATGT14707.6250304E-56.90156131
CTCTGCT19701.8309638E-66.62129451
GTCCGCA18202.7240992E-56.3706721
CCCGCAT17507.2814524E-45.7973121
CTTTAAC17300.0039965955.44545131
GTTCGGA18000.00637041365.23368451
CGCAGCT18200.00724938055.17617131
ATCAATT32451.5346377E-65.1362931
GGTGAAT23007.840868E-45.04114061
Produced by FastQC (version 0.11.5)