FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007969

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007969
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences874308
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AATTAGT2700.00267664915.7807717
GTCCCTC3250.00915842813.1109293
CTTCAGA6150.0054627049.2821131
CTCCAAA7900.00457653268.1291931
CATCAAT12751.202208E-47.27553941
ATCAAAC10150.0056540686.99640046
CTTTCCC11950.00356472666.5683581
CTTCAAA12550.00594290446.2543331
AGGATTT12550.00624420636.22464373
Produced by FastQC (version 0.11.5)