FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007976

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007976
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences527545
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAATTG3200.00888171113.1706128
CTTGAAC6000.0049041639.4032041
TCGTTTT6450.0091701518.713172
AGTCCTC3550.00778835175.144577540-44
Produced by FastQC (version 0.11.5)