FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007977

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007977
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences823661
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCCCC1003.6367011E-412.845842140-144
CCCAAGA4500.00572891411.1200321
CTTCGAT7904.4795847E-49.0488521
GTTTGAA10700.00108960457.3490211
CTCCAGC12400.00514492356.34149361
Produced by FastQC (version 0.11.5)