FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007983

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007983
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1038972
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT4303.0461914E-413.1164239
CACACGT4454.0692778E-412.6742947
ACACGTC5250.001628043710.7429748
GCACACG7302.3331969E-49.65763956
AGCACAC5900.0042835739.5603475
AGAGCAC7955.472541E-48.8697293
TTTCGCC14007.078481E-67.5536547
CTTTCGC10250.00637392476.91071751
CGAAGAT12350.0054293656.3091771
CAACACC15150.0071349635.6106811
CAGGAAT15350.0082449415.53757761
TTCTCCG17050.00464765035.3754267
Produced by FastQC (version 0.11.5)