FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007984

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007984
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences855475
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGGACT1950.00704800518.4933728
CGGAAAT14851.13631795E-57.3040521
TTGAATC9950.0039901557.25162462
CTTCATT14700.00406185075.9028661
CTTTTTT33951.2857527E-75.324751
Produced by FastQC (version 0.11.5)