FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007989

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007989
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1016011
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTAGCA3800.002077611212.735326
AAATAGG7400.00337636338.4082626
TCACGCC10100.00699133436.845019
CTTTAAA10450.0091657616.6557111
GTTTCAA12350.0065646876.1949311
CAAATAT14608.5965265E-46.19300271
CTTTGAT13850.00322700396.0261821
AAGGATT14250.00473384055.82243354
CTTTTTT29853.7134942E-65.1261241
Produced by FastQC (version 0.11.5)