FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007992

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007992
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences677626
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCATTG5350.001368318710.9680671
CTTCAAA11351.9998422E-58.4012011
CACAAAA10355.8022956E-47.79554031
TCCGCAG9550.00275839477.5303319
CTTCAAT9750.00278477377.52296921
ACATTTT12900.0072752346.1331634
Produced by FastQC (version 0.11.5)